Gearshift specific installation instructions

The installation is not yet an easybuild recipe, so this procedure describes how you can install it in one of your own folders on gearshift. In order for the software to be installed on gearshift you will first have to load some modules. These modules are also necessary for running the software each time.

The first step of the installation procedure is to make a file with this name enable-WfExS-env.bash so you can just source this file each time you want to work with the software.

touch enable-WfExS-env.bash

This file needs to have the following content:

#!/bin/bash

module load Python/3.7.4-GCCcore-7.3.0-bare GCC/7.3.0-2.30 GCCcore/7.3.0 OpenSSL/1.1.1i-GCCcore-7.3.0

basedir="$(dirname "${BASH_SOURCE[0]}")"
case "$basedir" in
    /*)
        true
        ;;
    .)
        basedir="$PWD"
        ;;
    *)
        basedir="${PWD}/$basedir"
esac

source "$basedir"/WfExS-backend/.pyWEenv/bin/activate

For the installation procedure, make sure you comment out the last line by putting a # at the start of the line.

# source "$basedir"/WfExS-backend/.pyWEenv/bin/activate

Follow the instructions for installing WfExs as described above. When the installation is done you need to reopen enable-WfExS-env.bash file again to remove the # in the last line of the file.

This folder/files will be there after the installation so when you try to source it, you will produce an error. Make sure your file is executable and then source the enable-WfExS-env.bash file.

chmod +x enable-WfExS-env.bash
source enable-WfExS-env.bash

This file loads 3 modules (python 3.7.4 , GCC 7.3.0 and OpenSSL 1.1.1) which are needed for working with WfExS, and it is sourcing the Python environment .pyWEenv which you need loaded everytime you work with WfExs.