Welcome to WfExS-backend’s documentation!#
WfExS-backend (/why’fex/) is a high-level workflow orchestrator designed for reproducible and secure workflow executions in isolated environments, promoting analysis reproducibility and replicability using potentially sensitive data. Mainly, WfExS is used to import and execute workflows.
Note
This project is under active development.
Content
- 🚀 Getting Started
- 📄 Configuration
- ⚙️ Executing WfExS
- How to Contribute
- General Websites
- Available features
- Command-line description
- CLI directives
- Presentations and Outreach
- JSON Schema Reference
- WfExS-backend cache metadata
- WfExS-backend exports definition
- WfExS-backend config
- WfExS-backend stage definition
- 1. Property
WfExS-backend stage definition > trs_endpoint
- 2. Property
WfExS-backend stage definition > version
- 3. Property
WfExS-backend stage definition > workflow_id
- 4. Property
WfExS-backend stage definition > nickname
- 5. Property
WfExS-backend stage definition > paranoid_mode
- 6. Property
WfExS-backend stage definition > workflow_type
- 7. Property
WfExS-backend stage definition > workflow_config
- 8. Property
WfExS-backend stage definition > placeholders
- 9. Property
WfExS-backend stage definition > params
- 10. Property
WfExS-backend stage definition > profile
- 11. Property
WfExS-backend stage definition > environment
- 12. Property
WfExS-backend stage definition > outputs
- 13. Property
WfExS-backend stage definition > default_actions
- 1. Property
- WfExS-backend security context
- API Reference